2013 PhD. Assessing the impact of biodiversity on ecosystem function in clinically derived bacterial communities, King's College London.
2007 MSc. Forensic Science, King's College London.
2006 BSc. Hons Biochemistry with Medical Biochemistry, Cardiff University.
2013 - 2017 Postdoctoral Research Associate, Department of Life Sciences, Silwood Park Campus, Imperial College London.
All life depends on interactions with microscopic organisms. These interactions facilitate thousands of different organisms to communicate and have an impact on the whole ecosystem in both positive and negative ways. The use of, now commonplace, sequencing technologies has revolutionised the field of microbiology, but it is the ecology of these organisms that will allow us to understand what they are doing.
It is an exciting time to study microbial ecology. With the ever increasing technological advances we are now getting unparalleled amounts of data through which we can craft theories that underpin life on Earth. We can also use the knowledge of theory to tackle pressing issues such as the rise of antimicrobial resistance, pressures on food production, the progression of infectious disease, and rewilding of “lost” habitats.
6F4Z1106 How Science Works
6F4Z1107 Biomolecules and Cells
6F4Z1108 Fundamental Microbiology (Unit Coordinator)
6F5Z1001 Techniques and Applications in Molecular Biology
6F6Z101 Project (Biology/ Microbiology and Molecular Biology)
6F6Z1002 Environmental Microbiology
As a microbiologist and ecologist, I have a directed interest in how microbial species communicate (in terms of public goods and horizontal gene transfer) and are able to persist in highly diverse communities. This question allows me to combine experimental microbiology with next generation sequencing to go beyond simply surveying the diversity, and understand functional processes underpinning the community dynamics.
I currently utilise experimental microbial systems to investigate mechanistic processes that determine the survival of bacterial species within varied communities. This combines various “omic” approaches with the more traditional culture approach to understand the role this diversity plays in the wider functioning of the communities.
Many questions remain unanswered in microbial ecology; general, reproducible data that tests wider-ecological theories is paramount. To achieve this I use a wide variety of samples from rain-filled pools amongst the roots of trees to plant associated soil, and even sputum expectorated due to respiratory disease. This way I can ask both fundamental and highly applied questions of my data.
I currently have collaborations with institutions both here in the UK and aboard:
Imperial College London (UK)
King's College London (UK)
University of York (UK)
University of Utrecht (NL)
ML. Jones, J. Ramoneda, DW. Rivett, T. Bell (2017). Biotic resistance shapes the influence of propagule pressure on invasion success in bacterial communities. Ecology. 98(7), pp.1743-1749.
DW. Rivett, AK. Lilley, GJ. Connett, MP. Carroll, JP. Legg, et al. (2017). Contributions of Composition and Interactions to Bacterial Respiration Are Reliant on the Phylogenetic Similarity of the Measured Community. Microbial Ecology. 74(3), pp.757-760.
A. Jousset, C. Bienhold, A. Chatzinotas, L. Gallien, A. Gobet, et al. (2017). Where less may be more: how the rare biosphere pulls ecosystems strings. The ISME Journal. 11(4), pp.853-862.
DW. Rivett, T. Scheuerl, CT. Culbert, SB. Mombrikotb, E. Johnstone, et al. (2016). Resource-dependent attenuation of species interactions during bacterial succession. The ISME Journal. 10(9), pp.2259-2268.
M. Slater, DW. Rivett, L. Williams, M. Martin, T. Harrison, et al. (2014). The impact of azithromycin therapy on the airway microbiota in asthma. Thorax. 69(7), pp.673-674.
GB. Rogers, NMM. Zain, KD. Bruce, LD. Burr, AC. Chen, et al. (2014). A novel microbiota stratification system predicts future exacerbations in bronchiectasis. Ann Am Thorac Soc. 11(4), pp.496-503.
J. Kozlowska, DW. Rivett, LS. Vermeer, MP. Carroll, KD. Bruce, et al. (2013). A relationship between Pseudomonal growth behaviour and cystic fibrosis patient lung function identified in a metabolomic investigation. Metabolomics. 9(6), pp.1262-1273.
T. Marrs, KD. Bruce, K. Logan, DW. Rivett, MR. Perkin, et al. (2013). Is there an association between microbial exposure and food allergy? A systematic review. Pediatr Allergy Immunol. 24(4), pp.311-320.e8.
DW. Rivett, ML. Jones, J. Ramoneda, SB. Mombrikotb, E. Ransome, et al. Elevated success of multispecies bacterial invasions impacts community composition during ecological succession. Ecology Letters.
DW. Rivett, T. Bell Abundance determines the functional role of bacterial phylotypes in complex communities. Nature Microbiology.
ES. Fernandes, L. Liang, S-J. Smillie, F. Kaiser, R. Purcell, et al. (2012). TRPV1 deletion enhances local inflammation and accelerates the onset of systemic inflammatory response syndrome. J Immunol. 188(11), pp.5741-5751.
The Rare Biosphere (Institute of Diversity, Leipzig) 2015
Institute of Environmental Biology Symposium (Utrecht University) 2017
Molecular Microbial Ecology Group meeting (Imperial College) 2015
I have reviewed mansucripts for the following journals:
Royal Society Research Grant. Project title: Impact of plant diversity on the establishment of belowground, microbial communities. Primary Investigator
Royal Society International Exchange (with University of Utrecht, NL). Project title: Enhanced local adaptation of bacteria to plant-associated soil habitats through indigenous plasmids acquisition. Primary Investigator
Manchester Metropolitan University Research Accelerator Grant. Project title: Adaptation of bacteria, and spread of antimicrobial resistance genes, across an urbanisation gradient through conjugative plasmid transfer. Primary Investigator
Society for General Microbiology Harry Smith Summer Vacation Studentship. Project title: Characterisation of host range and fitness costs of environmentally isolated mercury resistant plasmids (VS15/34). Primary Investigator